chr1 : 198,149,657 198,149,834
177 bp 11 TFs 1 linked gene
This 177 bp open chromatin element is linked to NEK7 and is bound by 11 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NEK7 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:198,144,657 – 198,154,834
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 160 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 177 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 177 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 177 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 177 bp overlap
ChIP DE DE-FOXA2-2 177 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 177 bp overlap
ChIP DE DE-GATA4-2 177 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 177 bp overlap
ChIP DE DE-GATA6-2 177 bp overlap
NEUROD1 3 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 146 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 167 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 118 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 80 bp overlap
SMARCA4 3 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 177 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 177 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 169 bp overlap
SPI1 12 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 89 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 177 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 174 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 125 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 75 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 138 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 135 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 171 bp overlap
ChIP ME-1 GSE46044.SPI1.ME-1 177 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 75 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 87 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 153 bp overlap
ZBTB40 1 dataset
ChIP K562 ENCFF521DSV 53 bp overlap