chr1 : 193,242,229 193,242,475
246 bp 16 TFs 0 linked genes
This 246 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:193,237,229 – 193,247,475
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD3.MV4-11_IBET151_500nM 158 bp overlap
BRD4 1 dataset
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 111 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 217 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 86 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 140 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 182 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 145 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 144 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 140 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 240 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 102 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 246 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 169 bp overlap
ChIP foregut GSE117136.GATA6.foregut 130 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 124 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 127 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 246 bp overlap
RELA 1 dataset
ChIP KB GSE52469.RELA.KB 134 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 60 bp overlap
ZNF506 1 dataset
ChIP HEK293T GSE78099.ZNF506.HEK293T 98 bp overlap