chr10 : 80,070,172 80,070,399
227 bp 13 TFs 2 linked genes
This 227 bp open chromatin element is linked to TMEM254 and TMEM254-AS1 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TMEM254 8.3 kb Proximal Proximity
TMEM254-AS1 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:80,065,172 – 80,075,399
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 77 bp overlap
CTCF 11 datasets
ChIP dorsolateral prefrontal cortex ENCFF230SFD 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 221 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 208 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 227 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 192 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 227 bp overlap
MYOD1 2 datasets
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 50 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 115 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 71 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 227 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 141 bp overlap
ChIP K562 ENCFF167YID 57 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 85 bp overlap
OLIG2 5 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 227 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 227 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 226 bp overlap
ChIP brain-prefrontal-cortex_2017025 GSE129039.OLIG2.brain-prefrontal-cortex_2017025 227 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 227 bp overlap
REST 4 datasets
ChIP H1 ENCFF429RUE 102 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 122 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 105 bp overlap
ChIP hippocampus GSE144226.REST.hippocampus 225 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 182 bp overlap