Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

20 transcription factors

CRX 2 datasets

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 346 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 279 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 203 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 100 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 164 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 357 bp overlap

ChIP DE DE-FOXA2-2 357 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 357 bp overlap

ChIP DE DE-GATA4-2 357 bp overlap

ChIP foregut GSE117136.GATA4.foregut 169 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 357 bp overlap

ChIP DE DE-GATA6-2 357 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 290 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 357 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 285 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 357 bp overlap

IRF4 2 datasets

ChIP NCI-H929 GSE56857.IRF4.NCI-H929 95 bp overlap

ChIP NCI-H929 GSE142493.IRF4.NCI-H929 85 bp overlap

JUN 1 dataset

ChIP MCF-7_vehicle GSE102410.JUN.MCF-7_vehicle 212 bp overlap

NANOG 7 datasets

ChIP H1 ENCFF747ZPQ 123 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 144 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 206 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 110 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 327 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 126 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 127 bp overlap

NEUROD1 4 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 242 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 242 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 207 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 166 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 258 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 218 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 357 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 288 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 124 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 60 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 290 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 96 bp overlap

ZNF283 1 dataset

ChIP HEK293T GSE78099.ZNF283.HEK293T 169 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 64 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 165 bp overlap

Genome Browser