chr9 : 35,027,896 35,028,138
242 bp 27 TFs 1 linked gene
This 242 bp open chromatin element is linked to ENSG00000287868 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000287868 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:35,022,896 – 35,033,138
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 117 bp overlap
BRD4 1 dataset
ChIP Jurkat GSE83777.BRD4.Jurkat 116 bp overlap
CDK9 1 dataset
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 206 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE117492.ESR1.MCF-7 54 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 64 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 138 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 145 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 242 bp overlap
ChIP DE DE-FOXA2-2 242 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 183 bp overlap
GATA3 2 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 115 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 214 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 242 bp overlap
ChIP DE DE-GATA4-2 242 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 242 bp overlap
ChIP DE DE-GATA6-2 242 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 242 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 242 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 242 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 242 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 242 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 242 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 242 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 157 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 242 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 242 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 135 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 133 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 117 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 236 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 242 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 140 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 242 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 194 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 173 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 197 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 173 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 228 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 242 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 242 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 242 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 242 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 242 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 242 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 242 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 242 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 242 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 242 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 242 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 242 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 233 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 134 bp overlap
ChIP K562 ENCFF059YCJ 242 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 152 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 179 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 173 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 117 bp overlap
ChIP K562 ENCFF795CMH 242 bp overlap
ChIP K562 ENCFF975RXS 242 bp overlap