chr8 : 132,625,357 132,625,870
513 bp 24 TFs 3 linked genes
This 513 bp open chromatin element is linked to DNAAF11, KCNQ3, and PHF20L1 and is bound by 24 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
DNAAF11 294 bp At TSS Multiome
KCNQ3 144.6 kb Distal Multiome
PHF20L1 149.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:132,620,357 – 132,630,870
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
CDK2 1 dataset
ChIP T-47D_PROGESTIN_30M GSE53855.CDK2.T-47D_PROGESTIN_30M 117 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRC.CREB1.A-549 160 bp overlap
EBF1 1 dataset
Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 169 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 303 bp overlap
Ebf4 1 dataset
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 278 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 388 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 332 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 158 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 274 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 348 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 513 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 513 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 308 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 513 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 482 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 513 bp overlap
ChIP hESC GSE20650.NANOG.hESC 292 bp overlap
ChIP hESC GSE18292.NANOG.hESC 173 bp overlap
POU5F1 8 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 495 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 344 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 472 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 328 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 513 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 422 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 178 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 336 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 386 bp overlap
TBP 2 datasets
Motif ES_0h ES_0h-TBP_MA0108.3 7 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 230 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 355 bp overlap
Thap11 1 dataset
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 177 bp overlap
ZIM3 1 dataset
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZNF213 1 dataset
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF382 1 dataset
Motif ES_0h ES_0h-ZNF382_MA1594.1 24 bp overlap
Znf423 1 dataset
Motif ES_0h ES_0h-Znf423_MA0116.1 15 bp overlap