chr8 : 59,110,644 59,110,947
303 bp 19 TFs 2 linked genes
This 303 bp open chromatin element is linked to TOX and TOX-DT and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TOX 8.2 kb Proximal Proximity
TOX-DT 8.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:59,105,644 – 59,115,947
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP HUVEC-C_MS417 GSE60171.BRD3.HUVEC-C_MS417 246 bp overlap
BRD4 2 datasets
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 147 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 154 bp overlap
CDK9 1 dataset
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 303 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 218 bp overlap
CTCF 5 datasets
ChIP GM23338 ENCFF531QOI 165 bp overlap
ChIP H9 ENCFF152GTF 254 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 174 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 185 bp overlap
ChIP endodermal cell ENCFF471YCZ 246 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 303 bp overlap
ChIP DE DE-FOXA2-2 303 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 303 bp overlap
ChIP DE DE-GATA4-2 303 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 303 bp overlap
ChIP DE DE-GATA6-2 303 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 271 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 268 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 236 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 66 bp overlap
MYB 2 datasets
ChIP DU528 GSE94000.MYB.DU528 275 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 153 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 296 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 282 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 303 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 99 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 182 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 140 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 147 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 158 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 143 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 238 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 71 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 67 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 150 bp overlap
ZNF778 1 dataset
ChIP HEK293T GSE78099.ZNF778.HEK293T 106 bp overlap