chr7 : 143,884,257 143,884,577
320 bp 12 TFs 1 linked gene
This 320 bp open chromatin element is linked to TCAF1 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TCAF1 693 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:143,879,257 – 143,889,577
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 158 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 170 bp overlap
ELF1 1 dataset
ChIP SK-N-SH ENCFF871YHY 268 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 96 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 320 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 115 bp overlap
RNF2 3 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 320 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 320 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 320 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 222 bp overlap