Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

38 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 233 bp overlap

CBFA2T2 1 dataset

ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 206 bp overlap

CBFA2T3 2 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 321 bp overlap

ChIP K562 ENCFF673OEZ 335 bp overlap

CTCF 1 dataset

ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 283 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 327 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 225 bp overlap

EPAS1 1 dataset

Motif DE_60h DE_60h-EPAS1_MA2325.1 9 bp overlap

ERG 1 dataset

ChIP K-562_DOX GSE23730.ERG.K-562_DOX 157 bp overlap

ESRRA 1 dataset

ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 173 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 475 bp overlap

ChIP DE DE-FOXA2-2 450 bp overlap

GATA1 4 datasets

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 118 bp overlap

ChIP K-562 GSE107726.GATA1.K-562 253 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 289 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 228 bp overlap

GATA1::TAL1 2 datasets

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 478 bp overlap

ChIP DE DE-GATA4-2 478 bp overlap

ChIP foregut GSE117136.GATA4.foregut 365 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 415 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 401 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 478 bp overlap

ChIP DE DE-GATA6-2 478 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 365 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 407 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 385 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 150 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 352 bp overlap

ChIP foregut GSE117136.GATA6.foregut 322 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 295 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 374 bp overlap

HES7 1 dataset

Motif DE_60h DE_60h-HES7_MA0822.1 12 bp overlap

HIF1A 1 dataset

Motif DE_60h DE_60h-HIF1A_MA1106.2 6 bp overlap

Hnf1A 1 dataset

Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap

KDM1A 1 dataset

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 224 bp overlap

LDB1 1 dataset

ChIP K-562 GSE142227.LDB1.K-562 274 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 222 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 234 bp overlap

NR2F2 2 datasets

ChIP K-562 ENCSR000BRS.NR2F2.K-562 243 bp overlap

ChIP K562 ENCFF004YPK 304 bp overlap

Nr2e3 1 dataset

Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 449 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 277 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 418 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 289 bp overlap

SMARCA4 1 dataset

ChIP NSC GSE125033.SMARCA4.NSC 240 bp overlap

SOX10 1 dataset

Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap

SOX4 1 dataset

Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap

Sox11 1 dataset

Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap

Sox17 1 dataset

Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap

Sox5 1 dataset

Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap

Sox6 1 dataset

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

Sox7 1 dataset

Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap

TAL1 9 datasets

ChIP K-562 ENCSR106FRG.TAL1.K-562 240 bp overlap

ChIP K-562 ENCSR000EHB.TAL1.K-562 212 bp overlap

ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 219 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 303 bp overlap

ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 218 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 247 bp overlap

ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 144 bp overlap

ChIP K562 ENCFF661CCK 217 bp overlap

ChIP ProEs GSE59087.TAL1.ProEs 117 bp overlap

TEAD4 1 dataset

ChIP K562 ENCFF673NIK 264 bp overlap

TRIM28 1 dataset

ChIP K-562 ENCSR000BRW.TRIM28.K-562 130 bp overlap

ZEB1 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 112 bp overlap

ZNF354C 1 dataset

Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap

Genome Browser