chr7 : 47,956,247 47,956,543
296 bp 22 TFs 1 linked gene
This 296 bp open chromatin element is linked to PKD1L1 and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PKD1L1 7.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:47,951,247 – 47,961,543
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 141 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 283 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 171 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 287 bp overlap
ESR1 1 dataset
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 196 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 296 bp overlap
ChIP DE DE-FOXA2-2 296 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 157 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 296 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 286 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 232 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 296 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 296 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 296 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 295 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 253 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 171 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 204 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 141 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 129 bp overlap
PGR 2 datasets
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 173 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 149 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 120 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 270 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 296 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 265 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 282 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 283 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 277 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 201 bp overlap