chr1 : 15,157,137 15,157,352
215 bp 20 TFs 2 linked genes
This 215 bp open chromatin element is linked to TMEM51-AS1 and TMEM51 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TMEM51-AS1 3.5 kb Proximal Proximity
TMEM51 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:15,152,137 – 15,162,352
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 130 bp overlap
BRD2 3 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 101 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 215 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 77 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 97 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 94 bp overlap
BRD4 3 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 185 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 209 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 215 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 116 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 166 bp overlap
EZH2 1 dataset
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 185 bp overlap
FOXA1 21 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 195 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 183 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 215 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 215 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 201 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 173 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 162 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 103 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 180 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 215 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 177 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 205 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 215 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 215 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 215 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 215 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 215 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 213 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 157 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 211 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 194 bp overlap
FOXA2 12 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 215 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 215 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 210 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 215 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 97 bp overlap
ChIP DE DE-FOXA2-1 215 bp overlap
ChIP DE DE-FOXA2-2 215 bp overlap
ChIP HepG2 ENCFF533COJ 215 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 215 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 215 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 215 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 206 bp overlap
GATA4 2 datasets
ChIP foregut GSE117136.GATA4.foregut 168 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 215 bp overlap
IRF1 2 datasets
ChIP K-562 ENCSR854MCV.IRF1.K-562 64 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 215 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 161 bp overlap
MEN1 1 dataset
ChIP IMS-M2_DMSO GSE129636.MEN1.IMS-M2_DMSO 157 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 121 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 135 bp overlap
POLR2A 2 datasets
ChIP sigmoid colon ENCFF748YVT 176 bp overlap
ChIP sigmoid colon ENCFF754JQR 143 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 215 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 149 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 56 bp overlap