chr6 : 24,943,635 24,944,280
645 bp 15 TFs 2 linked genes
This 645 bp open chromatin element is linked to ENSG00000288887 and RIPOR2 and is bound by 15 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000288887 7.6 kb Proximal Proximity
RIPOR2 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:24,938,635 – 24,949,280
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 250 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 241 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 188 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 440 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 268 bp overlap
FOXA1 1 dataset
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 132 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 645 bp overlap
ChIP DE DE-FOXA2-2 645 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 110 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 592 bp overlap
ChIP DE DE-GATA4-2 645 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 559 bp overlap
ChIP DE DE-GATA6-2 639 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 308 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 441 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 423 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 489 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 584 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 280 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 597 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 487 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 528 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 506 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 97 bp overlap