chr6 : 3,992,041 3,992,243
202 bp 16 TFs 0 linked genes
This 202 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:3,987,041 – 3,997,243
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 65 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 92 bp overlap
CTCF 3 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 202 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 65 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 154 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 114 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 145 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 173 bp overlap
GATA1 4 datasets
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 128 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 168 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 140 bp overlap
ChIP K562 ENCFF094CMK 173 bp overlap
GATA2 1 dataset
ChIP WA09 GSE105081.GATA2.WA09 153 bp overlap
GATA3 3 datasets
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 171 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 167 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 202 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 202 bp overlap
ChIP DE DE-GATA4-2 202 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 202 bp overlap
ChIP foregut GSE117136.GATA4.foregut 202 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 202 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 202 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 176 bp overlap
ChIP DE DE-GATA6-1 202 bp overlap
ChIP DE DE-GATA6-2 202 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 202 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 202 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 202 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 202 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 202 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 202 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 94 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 202 bp overlap
ChIP foregut GSE117136.GATA6.foregut 202 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 202 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 202 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 170 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 202 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap