chr5 : 163,451,612 163,452,027
415 bp 12 TFs 3 linked genes
This 415 bp open chromatin element is linked to CCNG1, NUDCD2, and HMMR and is bound by 12 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
CCNG1 7.8 kb Proximal Proximity
NUDCD2 8.1 kb Proximal Proximity
HMMR 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:163,446,612 – 163,457,027
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 149 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
E2F1 1 dataset
ChIP HeLa GSE22478.E2F1.HeLa 161 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 149 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 127 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHG.NR3C1.A-549 127 bp overlap
POLR2A 5 datasets
ChIP GM12891 ENCFF127ICP 368 bp overlap
ChIP GM12891 ENCFF127ICP 304 bp overlap
ChIP H1 ENCFF833NJP 299 bp overlap
ChIP HCT116 ENCFF508RDJ 251 bp overlap
ChIP K562 ENCFF262YXJ 392 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 151 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 117 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 126 bp overlap