Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

21 transcription factors

BRD4 1 dataset

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 169 bp overlap

CEBPA 1 dataset

ChIP liver ERP002306.CEBPA.liver 56 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 297 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 354 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 380 bp overlap

CTCF 2 datasets

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 320 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 394 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 292 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 264 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 350 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 394 bp overlap

ChIP DE DE-GATA4-2 394 bp overlap

GATA6 2 datasets

ChIP DE DE-GATA6-2 394 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 235 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 329 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 295 bp overlap

MYCN 1 dataset

ChIP CHP-134 GSE129588.MYCN.CHP-134 201 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 297 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 223 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 366 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 165 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 268 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 394 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 394 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 203 bp overlap

SOX11 1 dataset

ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 92 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 280 bp overlap

ZNF283 1 dataset

ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap

Genome Browser