chr1 : 95,744,525 95,744,873
348 bp 22 TFs 1 linked gene
This 348 bp open chromatin element is linked to ENSG00000271252 and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000271252 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:95,739,525 – 95,749,873
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 180 bp overlap
BRD4 1 dataset
ChIP HAP1 GSE108387.BRD4.HAP1 310 bp overlap
CEBPA 1 dataset
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 94 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 138 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 244 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 295 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 348 bp overlap
ChIP DE DE-FOXA2-2 348 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 228 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 348 bp overlap
ChIP DE DE-GATA4-2 348 bp overlap
ChIP foregut GSE117136.GATA4.foregut 336 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 348 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 348 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 348 bp overlap
ChIP DE DE-GATA6-2 348 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 348 bp overlap
ChIP foregut GSE117136.GATA6.foregut 291 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 348 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 266 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 348 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 250 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 227 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 320 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 348 bp overlap
ONECUT2 2 datasets
ChIP PC-3_hypoxia GSE106305.ONECUT2.PC-3_hypoxia 226 bp overlap
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 331 bp overlap
PDX1 1 dataset
ChIP hESC GSE58685.PDX1.hESC 190 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 348 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 91 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 295 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 348 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 318 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 348 bp overlap
TP53 1 dataset
ChIP IMR-90 GSE42728.TP53.IMR-90 95 bp overlap