chr5 : 110,267,812 – 110,268,022
210 bp 22 TFs 0 linked genes
This 210 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:110,262,812 – 110,273,022
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
CTCF 88 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 210 bp overlap
ChIP A673 ENCFF123WOM 210 bp overlap
ChIP C4-2B ENCFF821XVN 210 bp overlap
ChIP C4-2B ENCFF821XVN 210 bp overlap
ChIP Caco-2 ENCFF753NZV 210 bp overlap
ChIP Caco-2 ENCFF934QYS 196 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 102 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 110 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 156 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 103 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 98 bp overlap
ChIP GM23338 ENCFF531QOI 210 bp overlap
ChIP GM23338 ENCFF531QOI 135 bp overlap
ChIP GM23338 ENCFF832KWE 210 bp overlap
ChIP H1 ENCFF764RHO 210 bp overlap
ChIP H9 ENCFF152GTF 204 bp overlap
ChIP H9 ENCFF152GTF 149 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 157 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 172 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 195 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 210 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 175 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 191 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 144 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 210 bp overlap
ChIP HCT116 ENCFF209YMI 190 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 110 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 148 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 205 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 171 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 153 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 154 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 178 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 136 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 192 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 127 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 163 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 96 bp overlap
ChIP HepG2 ENCFF348BUL 169 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 97 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 116 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 99 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 107 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 210 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 204 bp overlap
ChIP MCF 10A ENCFF988BGF 210 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 191 bp overlap
ChIP MCF-7 ENCFF139NQI 210 bp overlap
ChIP MCF-7 ENCFF198DQX 206 bp overlap
ChIP MCF-7 ENCFF494VXA 206 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 198 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 165 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 143 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 111 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 122 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 101 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 210 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 124 bp overlap
ChIP PC-3 ENCFF487TUI 210 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 210 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 120 bp overlap
ChIP SK-N-SH ENCFF575DMG 210 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 210 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 165 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 128 bp overlap
ChIP chondrocyte ENCFF134ORZ 210 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 210 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 132 bp overlap
ChIP endodermal cell ENCFF471YCZ 178 bp overlap
ChIP endothelial cell ENCFF663LIE 210 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 131 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 151 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 210 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 210 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 210 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 141 bp overlap
ChIP keratinocyte ENCFF667ULX 210 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 201 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 190 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 210 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 210 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 210 bp overlap
ChIP neural crest cell ENCFF182LWK 210 bp overlap
ChIP neural progenitor cell ENCFF581WPG 210 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 153 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 159 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 201 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 187 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 190 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 210 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 202 bp overlap
ChIP H1 ENCFF967OJF 210 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 141 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 137 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 151 bp overlap
ChIP HepG2 ENCFF906QIS 169 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 121 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 129 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAG1 4 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 192 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 168 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 158 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 165 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF671 1 dataset
ChIP HEK293T GSE78099.ZNF671.HEK293T 177 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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