chr5 : 90,353,129 90,353,453
324 bp 23 TFs 0 linked genes
This 324 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:90,348,129 – 90,358,453
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 258 bp overlap
BRD4 2 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 211 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 228 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 324 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 140 bp overlap
ESR1 18 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 290 bp overlap
ChIP MCF-7-Luc_E2 GSE78284.ESR1.MCF-7-Luc_E2 178 bp overlap
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 111 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 110 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 155 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 154 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 130 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 324 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 298 bp overlap
ChIP MCF-7_estradiol-aldosterone_4h GSE99626.ESR1.MCF-7_estradiol-aldosterone_4h 232 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 317 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 300 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 230 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 229 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 221 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 214 bp overlap
ChIP MCF-7_vehicle_4h GSE99626.ESR1.MCF-7_vehicle_4h 168 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 171 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 143 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 306 bp overlap
FOXA1 4 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 324 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 324 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 246 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 324 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 262 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 324 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 262 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 324 bp overlap
ChIP foregut GSE117136.GATA4.foregut 324 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 324 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 324 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 324 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 324 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 324 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 190 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 107 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 206 bp overlap
HNF1B 2 datasets
ChIP H9 ERP004206.HNF1B.H9 204 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 324 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 324 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 230 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 139 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 225 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 168 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 71 bp overlap
ChIP HepG2 ENCFF243FIR 166 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 324 bp overlap
PDX1 5 datasets
ChIP H9 ERP004206.PDX1.H9 130 bp overlap
ChIP hESC GSE58685.PDX1.hESC 324 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 324 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 324 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 324 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 219 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 324 bp overlap
TP63 3 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 324 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 230 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 181 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 190 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 64 bp overlap