chr1 : 93,072,187 – 93,072,818
631 bp 16 TFs 1 linked gene
This 631 bp open chromatin element is linked to MTF2 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MTF2 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:93,067,187 – 93,077,818
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 384 bp overlap
CTCF 8 datasets
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 103 bp overlap
ChIP H9 ENCFF152GTF 461 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 106 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 219 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 115 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 275 bp overlap
ChIP endodermal cell ENCFF471YCZ 200 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 451 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 463 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 595 bp overlap
ChIP DE DE-GATA4-2 587 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 303 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 594 bp overlap
ChIP DE DE-GATA6-2 562 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 387 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 359 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 631 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 299 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 278 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 516 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 291 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 226 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 421 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 257 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 407 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 413 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 568 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 211 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 526 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 344 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 269 bp overlap
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