chr5 : 59,625,028 59,625,455
427 bp 15 TFs 0 linked genes
This 427 bp open chromatin element has no linked target genes and is bound by 15 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:59,620,028 – 59,630,455
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 291 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 263 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 209 bp overlap
ChIP DE DE-FOXA2-1 221 bp overlap
ChIP DE DE-FOXA2-2 150 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 98 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 393 bp overlap
GATA4 7 datasets
ChIP A-549 GSE85002.GATA4.A-549 154 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 214 bp overlap
ChIP DE DE-GATA4-1 427 bp overlap
ChIP DE DE-GATA4-2 427 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 427 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 427 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 355 bp overlap
GATA6 11 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 170 bp overlap
ChIP DE DE-GATA6-1 412 bp overlap
ChIP DE DE-GATA6-2 427 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 427 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 427 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 427 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 427 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 427 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 427 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 139 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 427 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 400 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 279 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 427 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHG.NR3C1.A-549 162 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 135 bp overlap
POLR2A 1 dataset
ChIP Peyer's patch ENCFF767HVN 389 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 369 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 427 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 207 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 125 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 171 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 167 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 116 bp overlap
SPI1 1 dataset
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 95 bp overlap