chr5 : 3,593,719 3,593,942
223 bp 17 TFs 2 linked genes
This 223 bp open chromatin element is linked to IRX1 and ENSG00000259603 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
IRX1 1.9 kb Proximal Proximity
ENSG00000259603 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:3,588,719 – 3,598,942
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 153 bp overlap
CREB1 4 datasets
ChIP MCF-7 ENCFF867SAS 223 bp overlap
ChIP MCF-7 ENCFF867SAS 54 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 223 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 223 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 223 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 174 bp overlap
EZH2 10 datasets
ChIP H1 ENCFF232NZA 223 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 76 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 200 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 57 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 140 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 102 bp overlap
ChIP fibroblast of lung ENCFF479BAW 73 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 151 bp overlap
ChIP neural progenitor cell ENCFF018MKA 212 bp overlap
ChIP neural progenitor cell ENCFF472NFV 223 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 223 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 100 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 223 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 52 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 90 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 55 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 223 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 100 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 87 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 223 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF881NFR 223 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 182 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 179 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 161 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 157 bp overlap
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 81 bp overlap