chr4 : 176,198,590 176,198,794
204 bp 18 TFs 1 linked gene
This 204 bp open chromatin element is linked to SPATA4 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SPATA4 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:176,193,590 – 176,203,794
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 86 bp overlap
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 204 bp overlap
BRD2 1 dataset
ChIP HUVEC-C GSE60171.BRD2.HUVEC-C 178 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP MCF-7 ENCFF570JPP 204 bp overlap
CTCF 3 datasets
ChIP GM23338 ENCFF772DML 158 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 99 bp overlap
ChIP islet ERP004003.CTCF.islet 176 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 192 bp overlap
ChIP BLaER1 ENCFF460KDD 186 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 204 bp overlap
FOXA1 1 dataset
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 86 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 119 bp overlap
HOXB13 2 datasets
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 132 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 85 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 179 bp overlap
NANOG 2 datasets
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 153 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 94 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 71 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 198 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 163 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 204 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 204 bp overlap
ChIP K562 ENCFF421AVO 204 bp overlap
ChIP K562 ENCFF809XVG 204 bp overlap
ChIP MCF-7 ENCFF782EZS 204 bp overlap
ChIP MCF-7 ENCFF973QAD 204 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 204 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 204 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 204 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 93 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 118 bp overlap