chr4 : 165,380,954 165,381,094
140 bp 20 TFs 1 linked gene
This 140 bp open chromatin element is linked to CPE and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CPE 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:165,375,954 – 165,386,094
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 35 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 128 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 129 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 120 bp overlap
ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 89 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 133 bp overlap
ChIP LNCaP_DHT GSE83860.AR.LNCaP_DHT 120 bp overlap
ChIP LNCaP_DHT_TNFA GSE83860.AR.LNCaP_DHT_TNFA 118 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 140 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 140 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 140 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-Y GSE114732.AR.LNCaP_androgen-Y_hypoxia-Y 131 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 140 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 140 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 122 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 140 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 140 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 140 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 140 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 114 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 140 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 140 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 140 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 140 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 140 bp overlap
ChIP prostate GSE56288.AR.prostate 140 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 124 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 140 bp overlap
ChIP prostate_1239_T GSE130408.AR.prostate_1239_T 128 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 140 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 140 bp overlap
ChIP prostate_1853_T GSE130408.AR.prostate_1853_T 140 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 140 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 140 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 140 bp overlap
ChIP prostate_P7_T GSE130408.AR.prostate_P7_T 140 bp overlap
ARID2 1 dataset
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 78 bp overlap
CBX8 2 datasets
ChIP A-549 ENCSR616MOB.CBX8.A-549 140 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 140 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 140 bp overlap
FOXA1 11 datasets
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 140 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 140 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 140 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 140 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 140 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 140 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 140 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 140 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 140 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 130 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 140 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 140 bp overlap
ChIP DE DE-FOXA2-2 140 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 140 bp overlap
ChIP DE DE-GATA4-2 140 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 140 bp overlap
ChIP DE DE-GATA6-2 140 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 140 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 140 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 118 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 140 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 140 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 140 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 140 bp overlap
HOXB13 12 datasets
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 140 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 140 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 140 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 122 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 140 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 140 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 120 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 123 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 140 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 140 bp overlap
ChIP prostate_P7 GSE130408.HOXB13.prostate_P7 130 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 140 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 140 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 140 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 116 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 140 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 140 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 83 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 140 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 140 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 123 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 140 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 140 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 140 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 86 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 140 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 140 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 140 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 119 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 126 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 140 bp overlap