CPE
carboxypeptidase E

This gene encodes a member of the M14 family of metallocarboxypeptidases. The encoded preproprotein is proteolytically processed to generate the mature peptidase. This peripheral membrane protein cleaves C-terminal amino acid residues and is involved in the biosynthesis of peptide hormones and neurotransmitters, including insulin. This protein may also function independently of its peptidase activity, as a neurotrophic factor that promotes neuronal survival, and as a sorting receptor that binds to regulated secretory pathway proteins, including prohormones. Mutations in this gene are implicated in type 2 diabetes. [provided by RefSeq, Nov 2015]

Member of: DE-4 DE-4.1 Developmental clusters: GC7
Biological processes 31 terms
Expression (TPM)
CPE — as a Regulated Gene

TFs regulating CPE 0 TFs

Transcription factors with Perturb-seq knockdown data for CPE. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = CPE upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to CPE

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of CPE, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr4:165,112,149–165,113,934 266.1 kb Distal (>10kb) Multiome HiCAR 902
chr4:165,206,424–165,208,519 171.3 kb Distal (>10kb) Multiome 645
chr4:165,326,454–165,328,403 51.5 kb Distal (>10kb) Multiome 919
chr4:165,378,748–165,380,262 76 bp At TSS Multiome 796
chr4:165,380,954–165,381,094 1.9 kb Proximal (<10kb) 20
chr4:165,383,752–165,384,923 5.3 kb Proximal (<10kb) Multiome 263
chr4:165,493,149–165,493,950 114.5 kb Distal (>10kb) Multiome 270

Genome Browser

Genomic view of the CPE locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr4:165,102,149 – 165,503,950
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq