Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

43 transcription factors

ASCL1 1 dataset

Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap

Arid3a 1 dataset

Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap

DPF2 1 dataset

ChIP GM12878 ENCSR509FWH.DPF2.GM12878 207 bp overlap

Dux 1 dataset

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 325 bp overlap

FIGLA 1 dataset

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 365 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 354 bp overlap

ChIP DE DE-GATA4-2 391 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 335 bp overlap

ChIP DE DE-GATA6-2 425 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 352 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 277 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 392 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 321 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 415 bp overlap

Gfi1B 1 dataset

Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap

Hic1 1 dataset

Motif DE_36h DE_36h-Hic1_MA0739.2 8 bp overlap

LMO2 1 dataset

ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 324 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MSC 1 dataset

Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap

NFIA 1 dataset

Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap

NOTCH1 1 dataset

ChIP HPBALL GSE39263.NOTCH1.HPBALL 166 bp overlap

PPARA::RXRA 1 dataset

Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap

Pparg::Rxra 1 dataset

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

Ptf1A 1 dataset

Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap

SIX2 1 dataset

Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap

SKIL 1 dataset

ChIP GM12878 ENCSR212YKD.SKIL.GM12878 220 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 221 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 451 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 510 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 335 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 464 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 514 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 383 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 179 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 173 bp overlap

SNAI1 1 dataset

Motif DE_60h DE_60h-SNAI1_MA1558.2 7 bp overlap

SNAI3 1 dataset

Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 308 bp overlap

SPI1 1 dataset

ChIP GM12878 ENCFF134LCP 297 bp overlap

TCF12 2 datasets

Motif DE_60h DE_60h-TCF12_MA1648.2 7 bp overlap

ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 180 bp overlap

TCF3 1 dataset

Motif DE_60h DE_60h-TCF3_MA0522.4 7 bp overlap

TCF4 1 dataset

Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap

ZEB1 1 dataset

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZIC1 1 dataset

Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap

ZNF317 1 dataset

Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap

ZNF667 1 dataset

Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap

ZNF707 1 dataset

Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap

Zic1::Zic2 1 dataset

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap

Genome Browser