chr4 : 154,623,506 154,623,795
289 bp 21 TFs 1 linked gene
This 289 bp open chromatin element is linked to LRAT and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LRAT 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:154,618,506 – 154,628,795
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 194 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 237 bp overlap
ChIP K562 ENCFF673OEZ 289 bp overlap
CTCF 3 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 289 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 110 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 204 bp overlap
FOXA1 3 datasets
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 78 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 88 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 123 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 200 bp overlap
GATA1 3 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 163 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 153 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 235 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 245 bp overlap
ChIP DE DE-GATA4-2 289 bp overlap
ChIP foregut GSE117136.GATA4.foregut 229 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 289 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 223 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 238 bp overlap
ChIP DE DE-GATA6-2 289 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 137 bp overlap
ChIP foregut GSE117136.GATA6.foregut 234 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 253 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 203 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 239 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 238 bp overlap
ChIP K562 ENCFF968WBH 190 bp overlap
KDM1A 2 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 186 bp overlap
ChIP K562 ENCFF133OLU 279 bp overlap
KLF16 2 datasets
ChIP K-562 ENCSR760UVO.KLF16.K-562 153 bp overlap
ChIP K562 ENCFF464PIV 274 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 174 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 193 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 227 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 185 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 169 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 164 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 276 bp overlap
TAL1 7 datasets
ChIP CD34 GSE52924.TAL1.CD34 171 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 208 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 111 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 196 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 198 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 147 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 213 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 227 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 289 bp overlap