chr4 : 143,517,620 143,517,834
214 bp 13 TFs 2 linked genes
This 214 bp open chromatin element is linked to SMARCA5-AS1 and SMARCA5 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SMARCA5-AS1 3.0 kb Proximal Proximity
SMARCA5 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:143,512,620 – 143,522,834
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
ATF2 3 datasets
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 58 bp overlap
ChIP HEK293 ENCFF194VKZ 65 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 70 bp overlap
ATF7 3 datasets
ChIP GM12878 ENCFF037PYH 90 bp overlap
ChIP HepG2 ENCFF470FKK 62 bp overlap
ChIP MCF-7 ENCFF578WKB 57 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 214 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 198 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 214 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 134 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 214 bp overlap
ChIP DE DE-GATA4-2 214 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 214 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 214 bp overlap
ChIP DE DE-GATA6-2 214 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 147 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 214 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 214 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 214 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 150 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 214 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 182 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 108 bp overlap
ChIP K562 ENCFF163BSI 134 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 214 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 186 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 109 bp overlap