chr4 : 136,400,911 – 136,401,078
167 bp 16 TFs 1 linked gene
This 167 bp open chromatin element is linked to ENSG00000251567 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000251567 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:136,395,911 – 136,406,078
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP K-562 ENCSR869IUD.ATF2.K-562 55 bp overlap
CREB1 2 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 133 bp overlap
ChIP HepG2 ENCFF792THT 136 bp overlap
CTCF 141 datasets
ChIP 22Rv1 ENCFF466OXN 167 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 167 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 130 bp overlap
ChIP BE2C ENCFF757SRF 167 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 167 bp overlap
ChIP C4-2B ENCFF821XVN 167 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 111 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 162 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 156 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 167 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 142 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 136 bp overlap
ChIP GM23338 ENCFF531QOI 136 bp overlap
ChIP GM23338 ENCFF531QOI 82 bp overlap
ChIP GM23338 ENCFF772DML 123 bp overlap
ChIP H1 ENCFF230QSV 157 bp overlap
ChIP H1 ENCFF414GZI 167 bp overlap
ChIP H1 ENCFF764RHO 167 bp overlap
ChIP H54 ENCFF255TVO 167 bp overlap
ChIP H9 ENCFF152GTF 167 bp overlap
ChIP H9 ENCFF152GTF 106 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 167 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 167 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 167 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 167 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 167 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 167 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 167 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 167 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 167 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 167 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 167 bp overlap
ChIP HCT116 ENCFF003KHP 167 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 167 bp overlap
ChIP HeLa-S3 ENCFF565UFR 140 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 159 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 104 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 167 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 130 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 155 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 111 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 99 bp overlap
ChIP HepG2 ENCFF127KUP 167 bp overlap
ChIP HepG2 ENCFF194VBQ 167 bp overlap
ChIP HepG2 ENCFF348BUL 153 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 139 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 100 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 142 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 149 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 146 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 167 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 104 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 107 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 160 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 160 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 167 bp overlap
ChIP MCF-7 ENCFF162GNE 167 bp overlap
ChIP MCF-7 ENCFF198DQX 167 bp overlap
ChIP MCF-7 ENCFF414SZG 164 bp overlap
ChIP MCF-7 ENCFF424NQR 155 bp overlap
ChIP MCF-7 ENCFF494VXA 167 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 167 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 167 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 147 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 135 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 167 bp overlap
ChIP NB4 ENCFF155DNY 167 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 167 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 167 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 167 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 167 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 167 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 153 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 133 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 129 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 158 bp overlap
ChIP SK-N-SH ENCFF575DMG 167 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 167 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 167 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 123 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 144 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 124 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 88 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 145 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 152 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 164 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 123 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 159 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 128 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 123 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 103 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 163 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 142 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 121 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 157 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 167 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 167 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 167 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 167 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 167 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 167 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 112 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 167 bp overlap
ChIP chondrocyte ENCFF134ORZ 167 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 167 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 167 bp overlap
ChIP endodermal cell ENCFF471YCZ 167 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 167 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 167 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 127 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 111 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 167 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 167 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 167 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 167 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 167 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 119 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 112 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 115 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 167 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 167 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 167 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 167 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 141 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 167 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 150 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 156 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 167 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 138 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 167 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 128 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 134 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 167 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 167 bp overlap
ChIP neural progenitor cell ENCFF420RBO 167 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 167 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 167 bp overlap
ChIP osteocyte ENCFF929FPD 167 bp overlap
ChIP placenta ENCFF029PHY 167 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 167 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 129 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 138 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 136 bp overlap
FOXA1 1 dataset
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 130 bp overlap
NUP98-HOXA9 1 dataset
ChIP HEK293-FT GSE62586.NUP98-HOXA9.HEK293-FT 50 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 167 bp overlap
RAD21 25 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 85 bp overlap
ChIP H1 ENCFF698EWO 73 bp overlap
ChIP H1 ENCFF967OJF 167 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 167 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 123 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 167 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 151 bp overlap
ChIP HCT116 ENCFF568PEO 167 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 114 bp overlap
ChIP HepG2 ENCFF360ZSW 163 bp overlap
ChIP MCF-7 ENCFF724VCQ 167 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 156 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 148 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 118 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 136 bp overlap
ChIP SK-N-SH ENCFF747MAS 167 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 167 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 131 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 94 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 165 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 114 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 112 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 167 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 163 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 109 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 109 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 161 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 133 bp overlap
STAG1 6 datasets
ChIP HeLa GSE126990.STAG1.HeLa 167 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 167 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 153 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 113 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 143 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 120 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 167 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 104 bp overlap
ZNF331 3 datasets
ChIP GM23338 ENCFF410NSZ 129 bp overlap
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 167 bp overlap
ChIP HepG2 ENCFF842SZN 116 bp overlap
Huangfu Lab · Publications · Resources · Contact