chr4 : 118,849,832 118,849,968
136 bp 21 TFs 1 linked gene
This 136 bp open chromatin element is linked to SYNPO2 and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SYNPO2 718 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:118,844,832 – 118,854,968
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 136 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 93 bp overlap
ETV1 1 dataset
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 59 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 136 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 136 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 136 bp overlap
POU5F1 3 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 91 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 120 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 55 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 135 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 136 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 136 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 136 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 136 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 136 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 136 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 136 bp overlap
Stat5b 1 dataset
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 68 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 85 bp overlap
ZNF143 1 dataset
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ZNF449 1 dataset
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF76 1 dataset
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap