Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

28 transcription factors

ARID1A 1 dataset

ChIP NGP GSE134626.ARID1A.NGP 397 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 324 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 359 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 418 bp overlap

CTCF 4 datasets

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 362 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 418 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 402 bp overlap

EP300 2 datasets

ChIP neural ENCSR843ZUP.EP300.neural 406 bp overlap

ChIP neural cell ENCFF442QNK 211 bp overlap

ESR1 1 dataset

ChIP ZR751 ERP000783.ESR1.ZR751 220 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 320 bp overlap

FOXA1 3 datasets

ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 159 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 243 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 307 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-2 229 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 195 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 200 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-2 246 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 418 bp overlap

GATA6 1 dataset

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 335 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 302 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 232 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 418 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

NEUROD1 4 datasets

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 219 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 172 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 195 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 182 bp overlap

NRL 1 dataset

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 403 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 406 bp overlap

PGR 1 dataset

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 174 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 385 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 234 bp overlap

ChIP neural cell ENCFF882LXX 418 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 373 bp overlap

SMARCA4 6 datasets

ChIP NGP GSE134626.SMARCA4.NGP 418 bp overlap

ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 418 bp overlap

ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 126 bp overlap

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 418 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 259 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 409 bp overlap

SMARCC1 2 datasets

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 418 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 418 bp overlap

SOX11 1 dataset

ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap

TGIF1 1 dataset

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Genome Browser