chr4 : 8,554,088 8,554,425
337 bp 25 TFs 0 linked genes
This 337 bp open chromatin element has no linked target genes and is bound by 25 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:8,549,088 – 8,559,425
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 172 bp overlap
CTCF 3 datasets
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 159 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 256 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 147 bp overlap
CTCFL 1 dataset
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 174 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 337 bp overlap
ChIP BLaER1 ENCFF274GAT 125 bp overlap
ChIP BLaER1 ENCFF364PUR 139 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 262 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 337 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 112 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 261 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 295 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 337 bp overlap
ChIP DE DE-FOXA2-2 264 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 337 bp overlap
ChIP DE DE-GATA4-2 337 bp overlap
ChIP foregut GSE117136.GATA4.foregut 337 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 279 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 333 bp overlap
ChIP DE DE-GATA6-2 337 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 337 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 278 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 295 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 319 bp overlap
ChIP foregut GSE117136.GATA6.foregut 337 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 271 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 227 bp overlap
IRF1 1 dataset
ChIP HAEC_TNFa_4h GSE89970.IRF1.HAEC_TNFa_4h 150 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 337 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 168 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 280 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 227 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 337 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 331 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 307 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 166 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 238 bp overlap
TEAD4 1 dataset
ChIP BJ_fibroblast_CD13-pos GSE114367.TEAD4.BJ_fibroblast_CD13-pos 214 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 158 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 231 bp overlap
ZNF44 1 dataset
ChIP HEK293T GSE78099.ZNF44.HEK293T 56 bp overlap