chr4 : 4,416,547 4,416,806
259 bp 20 TFs 0 linked genes
This 259 bp open chromatin element has no linked target genes and is bound by 20 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:4,411,547 – 4,421,806
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 234 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 138 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 136 bp overlap
ESR1 1 dataset
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 75 bp overlap
GATA6 2 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 203 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 175 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 50 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 135 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 97 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 97 bp overlap
POLR2G 3 datasets
ChIP K562 ENCFF047BLG 259 bp overlap
ChIP K562 ENCFF047BLG 129 bp overlap
ChIP K562 ENCFF648YPL 129 bp overlap
RBM22 3 datasets
ChIP HepG2 ENCFF561IAJ 52 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 85 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 89 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 227 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 149 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 259 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 259 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 259 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 259 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 259 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 259 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 135 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 64 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 56 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 218 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 207 bp overlap