chr3 : 94,347,715 94,348,388
673 bp 16 TFs 0 linked genes
This 673 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:94,342,715 – 94,353,388
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
AR 1 dataset
ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 159 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 151 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 212 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 201 bp overlap
ChIP hESC GSE26097.EOMES.hESC 177 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 636 bp overlap
ChIP DE DE-FOXA2-2 490 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 412 bp overlap
ChIP DE DE-GATA4-2 586 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 445 bp overlap
ChIP DE DE-GATA6-2 572 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 396 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 453 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 435 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 462 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 529 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 584 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 465 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 546 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 251 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 543 bp overlap
NFYB 3 datasets
ChIP GM12878 ENCFF474DNH 100 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 147 bp overlap
ChIP WTC11 ENCFF751ZTQ 116 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 136 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 351 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 360 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 180 bp overlap
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 276 bp overlap