chr3 : 23,922,421 23,923,129
708 bp 17 TFs 2 linked genes
This 708 bp open chromatin element is linked to RPL15 and NKIRAS1 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RPL15 5.3 kb Proximal Proximity
NKIRAS1 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:23,917,421 – 23,928,129
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF274GAT 235 bp overlap
ChIP BLaER1 ENCFF274GAT 284 bp overlap
ChIP BLaER1 ENCFF844FIP 85 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 224 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 314 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF128TYE 342 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 179 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 261 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF262YXJ 297 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 351 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 507 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 103 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 125 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCFF308WOW 281 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 225 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 265 bp overlap
ZNF460 1 dataset
ChIP HepG2 ENCFF007NNM 339 bp overlap
ZNF580 1 dataset
ChIP HEK293 ENCFF906MQV 224 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 77 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCFF468FCG 343 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 287 bp overlap