chr2 : 132,407,700 132,408,225
525 bp 13 TFs 1 linked gene
This 525 bp open chromatin element is linked to GPR39 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GPR39 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:132,402,700 – 132,413,225
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 119 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 135 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 297 bp overlap
ChIP DE DE-FOXA2-1 506 bp overlap
ChIP DE DE-FOXA2-2 503 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 250 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 506 bp overlap
ChIP DE DE-GATA4-2 525 bp overlap
ChIP foregut GSE117136.GATA4.foregut 384 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 512 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 450 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 199 bp overlap
ChIP DE DE-GATA6-1 509 bp overlap
ChIP DE DE-GATA6-2 525 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 289 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 388 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 433 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 470 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 409 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 251 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 258 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 422 bp overlap
ChIP foregut GSE117136.GATA6.foregut 413 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 482 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 340 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 339 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 281 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 165 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 349 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHE.NR3C1.A-549 158 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 249 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 149 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 75 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 172 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 345 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 383 bp overlap