Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

25 transcription factors

ARNTL 1 dataset

ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 239 bp overlap

BRD2 1 dataset

ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 147 bp overlap

CRY1 2 datasets

ChIP U2OS GSE130602.CRY1.U2OS 259 bp overlap

ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 258 bp overlap

CTCF 63 datasets

ChIP 22Rv1 ENCFF466OXN 452 bp overlap

Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

ChIP GM23338 ENCFF531QOI 219 bp overlap

ChIP GM23338 ENCFF772DML 175 bp overlap

ChIP H1 ENCFF414GZI 217 bp overlap

ChIP H1 ENCFF764RHO 222 bp overlap

ChIP H9 ENCFF152GTF 265 bp overlap

ChIP HAP1 GSE152721.CTCF.HAP1 260 bp overlap

ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 203 bp overlap

ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 287 bp overlap

ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 168 bp overlap

ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 206 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 235 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 225 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 201 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 242 bp overlap

ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 208 bp overlap

ChIP HEK293 ENCFF498RMM 212 bp overlap

ChIP HEK293 ENCSR000DTW.CTCF.HEK293 174 bp overlap

ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 273 bp overlap

ChIP HUES-64 GSE97394.CTCF.HUES-64 217 bp overlap

ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 241 bp overlap

ChIP K-562_14376 GSE131349.CTCF.K-562_14376 137 bp overlap

ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 200 bp overlap

ChIP NCI-H929 ENCFF305JAB 350 bp overlap

ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 225 bp overlap

ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 197 bp overlap

ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 216 bp overlap

ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 185 bp overlap

ChIP T-47D GSE111923.CTCF.T-47D 250 bp overlap

ChIP T-47D GSE120162.CTCF.T-47D 127 bp overlap

ChIP WA01 ENCSR000BNH.CTCF.WA01 189 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 102 bp overlap

ChIP brain ENCFF685VRG 424 bp overlap

ChIP cardiac muscle cell ENCFF777TNC 292 bp overlap

ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 268 bp overlap

ChIP endodermal cell ENCFF471YCZ 257 bp overlap

ChIP endodermal cell ENCFF471YCZ 377 bp overlap

ChIP endothelial cell ENCFF663LIE 377 bp overlap

ChIP hESC_D0 GSE116862.CTCF.hESC_D0 259 bp overlap

ChIP hESC_D15 GSE116862.CTCF.hESC_D15 347 bp overlap

ChIP hESC_D5 GSE116862.CTCF.hESC_D5 418 bp overlap

ChIP hESC_D7 GSE116862.CTCF.hESC_D7 215 bp overlap

ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 156 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 141 bp overlap

ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 179 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 268 bp overlap

ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 231 bp overlap

ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 189 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 180 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 292 bp overlap

ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 190 bp overlap

ChIP leukemia GSE142161.CTCF.leukemia 229 bp overlap

ChIP nephron progenitor cell ENCFF455DMI 357 bp overlap

ChIP neural crest cell ENCFF182LWK 296 bp overlap

ChIP neural progenitor cell ENCFF420RBO 214 bp overlap

ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 239 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 190 bp overlap

ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 212 bp overlap

ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 193 bp overlap

ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 150 bp overlap

ChIP progenitor cell of endocrine pancreas ENCFF492KHV 331 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

Hand1 1 dataset

Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

MEF2C 1 dataset

Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap

NFIA 1 dataset

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

NFIC 1 dataset

Motif DE_12h DE_12h-NFIC_MA0161.3 7 bp overlap

NFIX 1 dataset

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

PBX1 1 dataset

Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap

PGR 1 dataset

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 118 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

RAD21 11 datasets

ChIP H1 ENCFF698EWO 177 bp overlap

ChIP H1 ENCFF967OJF 123 bp overlap

ChIP HAP1 GSE126634.RAD21.HAP1 244 bp overlap

ChIP HAP1 GSE152721.RAD21.HAP1 229 bp overlap

ChIP WA09 GSE105028.RAD21.WA09 404 bp overlap

ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 369 bp overlap

ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 130 bp overlap

ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 143 bp overlap

ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 153 bp overlap

ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 276 bp overlap

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 303 bp overlap

SMAD2 1 dataset

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

SPDEF 1 dataset

Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 171 bp overlap

ZNF136 1 dataset

Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 243 bp overlap

ZNF410 1 dataset

Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Genome Browser