chr2 : 102,616,246 – 102,616,377
131 bp 13 TFs 1 linked gene
This 131 bp open chromatin element is linked to SLC9A2 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SLC9A2 3.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:102,611,246 – 102,621,377
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
CEBPG 2 datasets
ChIP K562 ENCFF783ADE 79 bp overlap
ChIP MCF-7 ENCFF155HZI 51 bp overlap
CTCF 177 datasets
ChIP 22Rv1 ENCFF466OXN 131 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 131 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 131 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 79 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 131 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 131 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 131 bp overlap
ChIP A549 ENCFF669BWC 131 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 131 bp overlap
ChIP C4-2B ENCFF821XVN 131 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 131 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 99 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 66 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 131 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 75 bp overlap
ChIP CUTLL1 GSE115893.CTCF.CUTLL1 71 bp overlap
ChIP Calu3 ENCFF526MDS 131 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 131 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 131 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 131 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 131 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 131 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 131 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 131 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 131 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 69 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 84 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 55 bp overlap
ChIP GM23338 ENCFF832KWE 72 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 131 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 74 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 131 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 68 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 57 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 131 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 131 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 131 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 125 bp overlap
ChIP HFFc6 ENCFF005CJI 97 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 101 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 77 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 131 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 114 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 61 bp overlap
ChIP ID00015 GSE76922.CTCF.ID00015 63 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 69 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 70 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 131 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 131 bp overlap
ChIP K-562_CRISPRi_N4293 GSE131349.CTCF.K-562_CRISPRi_N4293 53 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 59 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 131 bp overlap
ChIP KMS-11 ENCFF853JKX 131 bp overlap
ChIP KMS-11_NSD2-Low GSE131651.CTCF.KMS-11_NSD2-Low 117 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 131 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 131 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 71 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 131 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 119 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 96 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 131 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 60 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 104 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 83 bp overlap
ChIP MDM_IFNb GSE103477.CTCF.MDM_IFNb 53 bp overlap
ChIP MIA-PaCa-2 GSE88734.CTCF.MIA-PaCa-2 53 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 64 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 107 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 131 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 131 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 131 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 131 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 69 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 131 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 131 bp overlap
ChIP Panc1 ENCFF056JQX 131 bp overlap
ChIP RWPE-1 ENCSR303GFI.CTCF.RWPE-1 121 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 131 bp overlap
ChIP RWPE1 ENCFF200GQF 102 bp overlap
ChIP RWPE1 ENCFF200GQF 106 bp overlap
ChIP RWPE2 ENCFF911IEE 131 bp overlap
ChIP SEM GSE117864.CTCF.SEM 105 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 58 bp overlap
ChIP SK-N-SH ENCFF575DMG 82 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 131 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 96 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 121 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 131 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 61 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 118 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 83 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 78 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 131 bp overlap
ChIP T-cell GSE115893.CTCF.T-cell 94 bp overlap
ChIP TALL-1 GSE115893.CTCF.TALL-1 61 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 87 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 131 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 131 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 93 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 74 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 60 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 131 bp overlap
ChIP VCaP ENCFF858YQT 131 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 131 bp overlap
ChIP WI-38VA13 GSE41048.CTCF.WI-38VA13 131 bp overlap
ChIP WTC11 ENCFF658QVH 131 bp overlap
ChIP activated B cell ENCFF418DVI 80 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 131 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 131 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 131 bp overlap
ChIP astrocyte ENCFF558APA 117 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 90 bp overlap
ChIP brain ENCFF163BBN 51 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 131 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 63 bp overlap
ChIP chondrocyte ENCFF134ORZ 131 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 81 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 93 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 131 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF265AZL 56 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 131 bp overlap
ChIP endothelial cell ENCFF663LIE 78 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 131 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 131 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 131 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 108 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 131 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 100 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 56 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 131 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 101 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 113 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 131 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 131 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 131 bp overlap
ChIP fibroblast_SKIN_ABDOMEN ENCSR000DPV.CTCF.fibroblast_SKIN_ABDOMEN 92 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 131 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 131 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 83 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 131 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 131 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 65 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 131 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 131 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 131 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 109 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 77 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 55 bp overlap
ChIP lymphoblast GSE155324.CTCF.lymphoblast 131 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 131 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 131 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 131 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 66 bp overlap
ChIP natural killer cell ENCFF517SNI 131 bp overlap
ChIP nerve_tibial ENCSR434XLP.CTCF.nerve_tibial 54 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 90 bp overlap
ChIP neural cell ENCFF335ADI 79 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 131 bp overlap
ChIP neuron GSE115407.CTCF.neuron 131 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 131 bp overlap
ChIP pancreas ENCFF372XNU 131 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.CTCF.peripheral-blood-neutrophil_PMA-1 116 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 131 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 131 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 131 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 131 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 131 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 131 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 130 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 131 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 131 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 81 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 131 bp overlap
ChIP stomach ENCSR185CCV.CTCF.stomach 63 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 92 bp overlap
ChIP tibial nerve ENCFF477JAK 131 bp overlap
ChIP tibial nerve ENCFF665IWH 131 bp overlap
ELF3 2 datasets
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 131 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 131 bp overlap
ERF 1 dataset
ChIP HepG2 ENCFF647PIT 50 bp overlap
ESR1 4 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 55 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 58 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 71 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 87 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 128 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 131 bp overlap
ChIP SK-N-MC ENCFF674XUJ 124 bp overlap
RAD21 16 datasets
ChIP GP5D GSE51234.RAD21.GP5D 59 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 61 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 131 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 67 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 131 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 102 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 131 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 131 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 97 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 131 bp overlap
ChIP LoVo_PHASEM GSE51290.RAD21.LoVo_PHASEM 92 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 80 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 96 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 99 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 55 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 64 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 108 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 87 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 80 bp overlap
SMC1A 2 datasets
ChIP HCT-116 GSE112000.SMC1A.HCT-116 87 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 131 bp overlap
SMC3 6 datasets
ChIP GP5D GSE51234.SMC3.GP5D 131 bp overlap
ChIP GP5D_SIRAD21 GSE51234.SMC3.GP5D_SIRAD21 69 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 86 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 131 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 87 bp overlap
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 122 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 54 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 62 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 62 bp overlap
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