chr2 : 98,442,387 98,442,834
447 bp 23 TFs 1 linked gene
This 447 bp open chromatin element is linked to INPP4A and is bound by 23 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
INPP4A 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:98,437,387 – 98,447,834
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 211 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
FOXA1 1 dataset
ChIP HepG2 ENCFF207NVJ 281 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 447 bp overlap
ChIP DE DE-FOXA2-2 447 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 447 bp overlap
ChIP DE DE-GATA4-2 447 bp overlap
ChIP foregut GSE117136.GATA4.foregut 447 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 447 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 337 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 447 bp overlap
ChIP DE DE-GATA6-2 447 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 447 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 447 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 447 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 447 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 447 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 447 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 447 bp overlap
ChIP foregut GSE117136.GATA6.foregut 309 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 423 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 292 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 271 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 447 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 392 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 447 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 447 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 339 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 447 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 259 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 325 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 447 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 447 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 447 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 447 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 447 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 447 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 447 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 447 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 447 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 447 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 302 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 279 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 206 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 447 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 283 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 65 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 447 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 324 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 333 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 276 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 308 bp overlap
T 3 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 192 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 53 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 255 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 78 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 314 bp overlap