chr2 : 80,868,144 – 80,869,407
1,263 bp 27 TFs 1 linked gene
This 1.3 kb open chromatin element is linked to ENSG00000230975 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000230975 782 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:80,863,144 – 80,874,407
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 116 bp overlap
ChIP BLaER1 ENCFF274GAT 113 bp overlap
DPRX 1 dataset
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 316 bp overlap
Elf5 1 dataset
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 1100 bp overlap
ChIP DE DE-FOXA2-2 1200 bp overlap
GATA1::TAL1 1 dataset
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 287 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 982 bp overlap
ChIP DE DE-GATA4-2 1153 bp overlap
ChIP foregut GSE117136.GATA4.foregut 933 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 595 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 980 bp overlap
ChIP DE DE-GATA6-2 1069 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 934 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 501 bp overlap
ChIP foregut GSE117136.GATA6.foregut 935 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 303 bp overlap
GFI1B 2 datasets
ChIP SET-2 GSE121424.GFI1B.SET-2 319 bp overlap
ChIP SET-2_GSK GSE121424.GFI1B.SET-2_GSK 246 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
JUND 1 dataset
Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap
KDM1A 1 dataset
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 211 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 416 bp overlap
ChIP D283-Med GSE92582.NEUROD1.D283-Med 344 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 431 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 274 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 222 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 107 bp overlap
NKX6-3 1 dataset
Motif DE_60h DE_60h-NKX6-3_MA1530.2 8 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 82 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 82 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 998 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 373 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 335 bp overlap
Six3 1 dataset
Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap
THRA 1 dataset
Motif DE_60h DE_60h-THRA_MA1969.2 18 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Wt1 1 dataset
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
ZNF135 1 dataset
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
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