chr1 : 33,867,680 33,868,167
487 bp 17 TFs 1 linked gene
This 487 bp open chromatin element is linked to HMGB4 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HMGB4 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:33,862,680 – 33,873,167
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 236 bp overlap
ChIP BLaER1 ENCFF460KDD 91 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 196 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 199 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 227 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 255 bp overlap
ChIP DE DE-GATA4-2 468 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 238 bp overlap
ChIP DE DE-GATA6-2 347 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 392 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 288 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 136 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 357 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 259 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 300 bp overlap
ChIP hESC GSE18292.NANOG.hESC 155 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 266 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 235 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 263 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 215 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 259 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 467 bp overlap
SOX2 3 datasets
ChIP RENVM GSE49404.SOX2.RENVM 112 bp overlap
ChIP hESC GSE18292.SOX2.hESC 162 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 183 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 199 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 120 bp overlap