chr2 : 43,215,695 43,216,094
399 bp 19 TFs 1 linked gene
This 399 bp open chromatin element is linked to ENSG00000287387 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000287387 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:43,210,695 – 43,221,094
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 314 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 399 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 399 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 229 bp overlap
KDM1A 7 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 158 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 64 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 197 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 83 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 88 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 255 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 89 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 309 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 258 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 399 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 399 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 399 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 399 bp overlap
ChIP hESC GSE18292.NANOG.hESC 195 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 152 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 242 bp overlap
POU5F1 7 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 399 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 399 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 227 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 351 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 326 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 399 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 256 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 253 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 271 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 291 bp overlap
SMARCA4 2 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 278 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 194 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 172 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 163 bp overlap
ChIP hESC GSE18292.SOX2.hESC 221 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 195 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 160 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 399 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 344 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 151 bp overlap
ZMYM3 1 dataset
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 248 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 254 bp overlap
ZNF629 1 dataset
ChIP HepG2 ENCFF490FFQ 83 bp overlap