chr2 : 40,392,217 40,392,609
392 bp 18 TFs 0 linked genes
This 392 bp open chromatin element has no linked target genes and is bound by 18 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:40,387,217 – 40,397,609
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 103 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 92 bp overlap
CTCF 4 datasets
ChIP B cell ENCFF500PZO 305 bp overlap
ChIP B cell ENCFF500PZO 392 bp overlap
ChIP astrocyte ENCFF558APA 256 bp overlap
ChIP astrocyte ENCFF558APA 392 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 218 bp overlap
ESR1 1 dataset
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 172 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 392 bp overlap
ChIP DE DE-FOXA2-2 322 bp overlap
GATA1 3 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 158 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 176 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 126 bp overlap
GATA2 4 datasets
ChIP WA09 GSE105081.GATA2.WA09 161 bp overlap
ChIP dermal-fibroblast GSE51025.GATA2.dermal-fibroblast 193 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 184 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 279 bp overlap
GATA3 5 datasets
ChIP BE2C GSE65664.GATA3.BE2C 196 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 222 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 140 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 177 bp overlap
ChIP SK-N-SH ENCFF040SSB 248 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 234 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 176 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 392 bp overlap
ChIP DE DE-GATA4-2 392 bp overlap
ChIP foregut GSE117136.GATA4.foregut 305 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 392 bp overlap
ChIP DE DE-GATA6-2 381 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 353 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 358 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 353 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 392 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 392 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 392 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 188 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 227 bp overlap
U2AF1L5,U2AF1 1 dataset
ChIP K562 ENCFF620FYM 328 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 249 bp overlap