chr22 : 32,139,785 32,140,267
482 bp 14 TFs 5 linked genes
This 482 bp open chromatin element is linked to 5 target genes and is bound by 14 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
RFPL2 65.0 kb Distal Multiome
SLC5A4-AS1 65.1 kb Distal Multiome
ENSG00000273325 144.6 kb Distal Multiome
YWHAH 195.5 kb Distal Multiome
RTCB 272.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:32,134,785 – 32,145,267
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 473 bp overlap
ChIP DE DE-FOXA2-2 482 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 402 bp overlap
ChIP DE DE-GATA4-2 482 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 404 bp overlap
ChIP DE DE-GATA6-2 482 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 345 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 482 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 453 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 469 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 323 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 267 bp overlap
GRHL2 1 dataset
ChIP WTC11 ENCFF105GQI 107 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_72h DE_72h-MEIS2_MA1640.2 9 bp overlap
PBX1 1 dataset
Motif DE_72h DE_72h-PBX1_MA0070.2 9 bp overlap
PBX2 1 dataset
Motif DE_72h DE_72h-PBX2_MA1113.3 9 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 482 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 358 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 278 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 412 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 482 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 482 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 482 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 482 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 296 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 287 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 266 bp overlap