chr20 : 49,733,540 49,734,199
659 bp 15 TFs 5 linked genes
This 659 bp open chromatin element is linked to 5 target genes and is bound by 15 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
B4GALT5 20.1 kb Distal Multiome
SLC9A8 79.0 kb Distal Multiome
PTGIS 165.8 kb Distal Multiome
RNF114 202.5 kb Distal Multiome
KCNB1 251.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:49,728,540 – 49,739,199
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 347 bp overlap
ChIP BLaER1 ENCFF460KDD 105 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 248 bp overlap
ESR1 3 datasets
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 264 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 316 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 418 bp overlap
FOXA1 1 dataset
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 159 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 659 bp overlap
ChIP DE DE-FOXA2-2 652 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 481 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 521 bp overlap
ChIP DE DE-GATA4-2 581 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 607 bp overlap
ChIP DE DE-GATA6-2 602 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 399 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 59 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 237 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 294 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 357 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 610 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 614 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap