Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

25 transcription factors

CTCF 3 datasets

ChIP HAP1 GSE152721.CTCF.HAP1 222 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 175 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 222 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 376 bp overlap

FOXA1 9 datasets

ChIP MCF-7 GSE140185.FOXA1.MCF-7 238 bp overlap

ChIP MCF-7_ARID1A-KO GSE140185.FOXA1.MCF-7_ARID1A-KO 234 bp overlap

ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 157 bp overlap

ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 214 bp overlap

ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 204 bp overlap

ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 205 bp overlap

ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 174 bp overlap

ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 191 bp overlap

ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 194 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 548 bp overlap

ChIP DE DE-FOXA2-2 548 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 212 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 477 bp overlap

ChIP DE DE-GATA4-2 548 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 245 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 543 bp overlap

ChIP DE DE-GATA6-2 548 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 548 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 548 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 548 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 548 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 548 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 548 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 539 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 339 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 298 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 393 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 410 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 548 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 416 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 296 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 541 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 354 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 313 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 531 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 497 bp overlap

ChIP hESC GSE18292.NANOG.hESC 99 bp overlap

ChIP hESC GSE18292.NANOG.hESC 77 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 84 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 188 bp overlap

POU5F1 8 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 400 bp overlap

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 548 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 214 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 113 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 481 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 475 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 449 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 548 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 548 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 548 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 548 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 548 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 494 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 548 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 548 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 172 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 539 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 424 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 307 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 369 bp overlap

SMARCC1 5 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 422 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 548 bp overlap

ChIP ESC S25-ESC-d0-BAF155-exp1 298 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 318 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 517 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 301 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 548 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 375 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 340 bp overlap

TEAD4 1 dataset

ChIP ESC S26-ESC-d0-TEAD4-exp1 448 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 303 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 292 bp overlap

Gene	Dist. to TSS	Distance	Link type
SLC52A3	15.2 kb	Distal	Multiome
FAM110A	42.6 kb	Distal	Multiome
CSNK2A1	247.4 kb	Distal	Multiome

Genome Browser