chr19 : 20,422,332 20,422,852
520 bp 16 TFs 1 linked gene
This 520 bp open chromatin element is linked to ENSG00000291130 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000291130 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:20,417,332 – 20,427,852
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 93 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 79 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 372 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 520 bp overlap
ChIP DE DE-GATA4-2 520 bp overlap
ChIP foregut GSE117136.GATA4.foregut 437 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 520 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 507 bp overlap
ChIP DE DE-GATA6-2 520 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 520 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 520 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 520 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 520 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 520 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 520 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 477 bp overlap
ChIP foregut GSE117136.GATA6.foregut 310 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 337 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 206 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 333 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 197 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 176 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 175 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 234 bp overlap
ChIP D283-Med GSE92582.NEUROD1.D283-Med 66 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 281 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 212 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 177 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF770YBQ 208 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 271 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 284 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 330 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 480 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 158 bp overlap
TCF7L2 2 datasets
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 208 bp overlap
ChIP Panc1 ENCFF829HHL 414 bp overlap