chr18 : 78,977,520 78,977,712
192 bp 20 TFs 2 linked genes
This 192 bp open chromatin element is linked to LINC01896 and SALL3 and is bound by 20 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
LINC01896 170 bp At TSS Proximity
SALL3 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:78,972,520 – 78,982,712
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
CEBPB 3 datasets
ChIP H1 ENCFF871PTR 152 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 161 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 124 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 128 bp overlap
Cebpa 5 datasets
ChIP BLaER1 ENCFF031ISE 192 bp overlap
ChIP BLaER1 ENCFF093OYK 192 bp overlap
ChIP BLaER1 ENCFF262VBH 82 bp overlap
ChIP BLaER1 ENCFF274GAT 192 bp overlap
ChIP BLaER1 ENCFF364PUR 145 bp overlap
EZH2 20 datasets
ChIP A673 ENCFF955JRZ 111 bp overlap
ChIP A673 ENCFF955JRZ 52 bp overlap
ChIP GM23338 ENCFF613YON 192 bp overlap
ChIP H1 ENCFF232NZA 192 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 192 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 192 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 192 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 192 bp overlap
ChIP astrocyte ENCFF365JTP 118 bp overlap
ChIP astrocyte ENCFF365JTP 174 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 192 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 155 bp overlap
ChIP fibroblast of lung ENCFF479BAW 192 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 192 bp overlap
ChIP hepatocyte ENCFF552DZB 192 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 71 bp overlap
ChIP neural cell ENCFF610EPB 65 bp overlap
ChIP neural cell ENCFF610EPB 192 bp overlap
ChIP neural progenitor cell ENCFF018MKA 192 bp overlap
ChIP neural progenitor cell ENCFF472NFV 192 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 158 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 80 bp overlap
ChIP H1 ENCFF078LED 192 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 101 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 192 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 142 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 115 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 57 bp overlap
ChIP H1 ENCFF239FFS 145 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 192 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 192 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 167 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 192 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 160 bp overlap
SMARCC1 2 datasets
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 192 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 192 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 51 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 192 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF507HGF 86 bp overlap
ChIP H1 ENCFF881NFR 192 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 192 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 145 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 192 bp overlap