DE-7

DE-7.5

Submodule 15 genes

Lysosomal and immune response genes

This module contains 15 genes including HLA-C, HDAC1, CTSL, GSN, and ATP6AP2, with enrichment in lysosomal processes and immune response pathways. Knockdown of SOX11 activates this module. No TFs were identified whose knockdown represses this module.

Notable genes: HLA-C HDAC1 CTSL GSN ATP6AP2 ARG2 TRAP1 ATIC Top TFs: SOX11

TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (15)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z