DE-4

DE-4.19

Submodule 15 genes

Protein kinase signaling and cytoskeletal organization

This module contains 15 genes including CCN1, PRKCI, MAP3K8, and ACTN1, enriched for protein kinase signaling and cytoskeletal organization. Knockdown of SOX11 activates this module. No repressing transcription factors were identified.

Notable genes: CCN1 PRKCI MAP3K8 ACTN1 NECTIN2 TNFAIP1 NUAK2 PCSK7 Top TFs: SOX11

TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (15)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z