DE-2

DE-2.45

Submodule 10 genes

Copper transport and protein quality control

This module contains 10 genes including ATP7B, DNAJC5, POM121, ZC3H7B, and BLTP3A, with enriched terms related to copper ion transport, metal homeostasis, and protein folding. Knockdown of SOX17 activates this module, while knockdown of EOMESODERMIN represses it. The module's activation upon SOX17 loss suggests a compensatory role in cellular metal handling during endoderm specification.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (10)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z